Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_2140003Uncharacterized protein. (320 aa)    
Predicted Functional Partners:
MPLA_2140002
Uncharacterized protein.
     0.978
MPLA_2140001
ParB domain-containing protein; Belongs to the ParB family.
 
     0.717
MPLA_2140005
Uncharacterized protein.
 
     0.582
trbI
Putative TRBI CONJUGAL TRANSFER TRANSMEMBRANE PROTEIN.
 
     0.538
MPLA_2130049
Putative plasmid transfer factor, traG protein.
 
    0.523
MPLA_2130022
Putative conjugal transfer protein trbI.
 
     0.521
traG
Conjugal transfer protein TraG.
 
    0.520
MPLA_2130158
Uncharacterized protein.
  
     0.476
MPLA_2130079
Uncharacterized protein.
  
     0.454
MPLA_2140026
Uncharacterized protein.
  
     0.454
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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