Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fixSNitrogen fixation protein FixS. (51 aa)    
Predicted Functional Partners:
fixI
Nitrogen fixation protein FixI.
 
  
 0.936
fixH
Nitrogen fixation protein FixH.
 
  
 0.932
fixG
Nitrogen fixation protein FixG.
 
  
 0.917
fixP
Cbb3-type cytochrome c oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 
 0.900
MPLA_2140034
Cytochrome c oxidase, cbb3-type, subunit II.
 
 
 0.877
fixP-2
Cbb3-type cytochrome c oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 
 0.833
MPLA_830029
Cytochrome c oxidase, cbb3-type, subunit II.
 
 
 0.833
MPLA_2140035
Cytochrome c oxidase polypeptide I fixN homolog; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.819
MPLA_830028
Nitrogen fixation protein FixQ.
 
 
 0.775
fixN
Cytochrome c oxidase subunit 1 homolog, bacteroid; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.756
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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