MPLA_230024 protein (Mesorhizobium sp. ORS3359)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

MPLA_230024

N-acetyltransferase domain-containing protein. (162 aa)

Predicted Functional Partners:

gatB

0.816

MPLA_150010

0.666

MPLA_1800168

0.594

MPLA_340148

0.594

MPLA_230026

0.567

MPLA_970016

0.541

MPLA_1780024

0.521

MPLA_1700026

0.502

MPLA_230023

0.501

MPLA_1650035

0.492

Your Current Organism:

Mesorhizobium sp. ORS3359

NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPLA_150010	MPLA_1650035	MPLA_150010	MPLA_1650035	Uncharacterized protein.	Uncharacterized protein.	0.712
MPLA_150010	MPLA_1700026	MPLA_150010	MPLA_1700026	Uncharacterized protein.	Acetyltransf_6 domain-containing protein.	0.728
MPLA_150010	MPLA_1780024	MPLA_150010	MPLA_1780024	Uncharacterized protein.	Uncharacterized protein.	0.614
MPLA_150010	MPLA_230024	MPLA_150010	MPLA_230024	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.666
MPLA_150010	MPLA_970016	MPLA_150010	MPLA_970016	Uncharacterized protein.	Uncharacterized protein.	0.650
MPLA_1650035	MPLA_150010	MPLA_1650035	MPLA_150010	Uncharacterized protein.	Uncharacterized protein.	0.712
MPLA_1650035	MPLA_1700026	MPLA_1650035	MPLA_1700026	Uncharacterized protein.	Acetyltransf_6 domain-containing protein.	0.711
MPLA_1650035	MPLA_1780024	MPLA_1650035	MPLA_1780024	Uncharacterized protein.	Uncharacterized protein.	0.571
MPLA_1650035	MPLA_230024	MPLA_1650035	MPLA_230024	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.492
MPLA_1650035	MPLA_970016	MPLA_1650035	MPLA_970016	Uncharacterized protein.	Uncharacterized protein.	0.750
MPLA_1700026	MPLA_150010	MPLA_1700026	MPLA_150010	Acetyltransf_6 domain-containing protein.	Uncharacterized protein.	0.728
MPLA_1700026	MPLA_1650035	MPLA_1700026	MPLA_1650035	Acetyltransf_6 domain-containing protein.	Uncharacterized protein.	0.711
MPLA_1700026	MPLA_1780024	MPLA_1700026	MPLA_1780024	Acetyltransf_6 domain-containing protein.	Uncharacterized protein.	0.743
MPLA_1700026	MPLA_230024	MPLA_1700026	MPLA_230024	Acetyltransf_6 domain-containing protein.	N-acetyltransferase domain-containing protein.	0.502
MPLA_1700026	MPLA_970016	MPLA_1700026	MPLA_970016	Acetyltransf_6 domain-containing protein.	Uncharacterized protein.	0.727
MPLA_1780024	MPLA_150010	MPLA_1780024	MPLA_150010	Uncharacterized protein.	Uncharacterized protein.	0.614
MPLA_1780024	MPLA_1650035	MPLA_1780024	MPLA_1650035	Uncharacterized protein.	Uncharacterized protein.	0.571
MPLA_1780024	MPLA_1700026	MPLA_1780024	MPLA_1700026	Uncharacterized protein.	Acetyltransf_6 domain-containing protein.	0.743
MPLA_1780024	MPLA_230024	MPLA_1780024	MPLA_230024	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.521
MPLA_1780024	MPLA_970016	MPLA_1780024	MPLA_970016	Uncharacterized protein.	Uncharacterized protein.	0.726