STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_230046Lysine exporter protein (LYSE/YGGA). (216 aa)    
Predicted Functional Partners:
MPLA_1830263
Lysine exporter protein (LYSE/YGGA).
  
     0.774
MPLA_540012
Lysine exporter protein (LYSE/YGGA).
  
     0.772
MPLA_380003
Uncharacterized protein.
  
     0.771
MPLA_230045
Thioesterase superfamily protein.
       0.636
echdc
Enoyl-CoA hydratase domain-containing protein 3, mitochondrial.
  
    0.441
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.418
rpsI
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
       0.418
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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