Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ycaN-3Putative DNA-binding transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
ydbC
Putative aldo/keto reductase, NAD(P)-binding.
 
     0.674
MPLA_1230027
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.600
MPLA_930028
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.580
MPLA_720035
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.556
MPLA_1850031
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.554
MPLA_230051
Uncharacterized protein.
       0.546
MPLA_290027
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.535
MPLA_1850044
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.534
MPLA_1650094
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.526
MPLA_760010
Nitrogen assimilation control protein; Belongs to the LysR transcriptional regulatory family.
  
     0.524
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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