Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ydbCPutative aldo/keto reductase, NAD(P)-binding. (290 aa)    
Predicted Functional Partners:
pdxH
Pyridoxine/pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
     
  0.822
MPLA_520026
Pyridoxal kinase; Belongs to the pyridoxine kinase family.
     
  0.822
MPLA_230051
Uncharacterized protein.
       0.773
ycaN-3
Putative DNA-binding transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.674
sgaA
Serine--glyoxylate aminotransferase.
   
 
  0.667
yeaE
Putative oxidoreductase.
 
 
0.546
MPLA_930007
WD-repeart protein, beta transducin-like.
   
  0.541
MPLA_1620047
Uncharacterized protein.
    
  0.530
MPLA_340150
Uncharacterized protein.
    
  0.530
MPLA_1390045
Glucose-methanol-choline oxidoreductase.
     
  0.515
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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