Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MPLA_230061Acetyltransf_6 domain-containing protein. (409 aa)    
Predicted Functional Partners:
MPLA_230060
Polysaccharide deacetylase.
 
     0.892
MPLA_230068
O-antigen polymerase.
 
   
 0.783
MPLA_230063
Exopolysaccharide transport protein family.
 
     0.776
MPLA_1700027
Multi antimicrobial extrusion protein MatE.
 
    0.774
MPLA_970020
Hpt protein.
  
     0.765
MPLA_230066
Putative transferase.
  
     0.761
MPLA_140322
Uncharacterized protein.
 
     0.755
MPLA_230032
Type IV pilus assembly PilZ.
  
     0.747
MPLA_810005
Peptidase A24A prepilin type IV.
  
     0.744
MPLA_810002
Pilus assembly protein CpaD.
  
     0.734
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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