Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_250044Uncharacterized protein. (202 aa)    
Predicted Functional Partners:
MPLA_250046
RHH_4 domain-containing protein.
 
    0.893
MPLA_250045
Uncharacterized protein.
       0.829
MPLA_580020
UPF0335 protein MPLA_580020; Belongs to the UPF0335 family.
  
   
 0.798
MPLA_180063
Putative cytoplasmic protein.
  
   
 0.790
MPLA_230020
NADH dehydrogenase.
 
   
 0.759
MPLA_810028
Uncharacterized protein.
  
     0.756
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.752
atpF-2
ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.745
MPLA_380017
Glutathione S-transferase.
  
     0.737
MPLA_1170060
Double-strand break repair protein AddB.
  
     0.734
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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