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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_250052Uncharacterized protein. (161 aa)    
Predicted Functional Partners:
MPLA_1100033
Uncharacterized protein.
 
 
 0.763
fabD
Malonyl CoA-acyl carrier protein transacylase.
  
 0.762
lcdH
L-carnitine dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
 
  
  0.750
MPLA_870003
AMP-dependent synthetase and ligase.
  
 0.726
MPLA_1680006
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein.
  
 
 0.702
ehhadh
Peroxisomal bifunctional enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.702
lcdH-2
L-carnitine dehydrogenase.
 
  
 0.630
lcdH-3
L-carnitine dehydrogenase.
 
  
 0.623
MPLA_1290017
Hydroxycinnamoyl-CoA hydratase-lyase.
   
 
  0.593
MPLA_790010
Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
  0.593
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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