STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_250066Xylose isomerase domain-containing protein TIM barrel. (303 aa)    
Predicted Functional Partners:
MPLA_250067
Oxidoreductase domain protein.
 
 
  0.959
melA-2
Alpha-galactosidase.
  
     0.760
agpA
Periplasmic alpha-galactoside-binding protein.
  
     0.733
melA
Alpha-galactosidase, NAD(P)-binding.
  
     0.728
MPLA_1720001
ThuA domain-containing protein.
 
     0.662
MPLA_90005
Extracellular solute-binding protein family 1.
  
    0.652
MPLA_430001
Oxidoreductase domain-containing protein.
 
 
  0.615
MPLA_90007
HTH arsR-type domain-containing protein.
  
     0.610
MPLA_930034
HTH arsR-type domain-containing protein.
  
     0.609
MPLA_1290002
ThuA domain-containing protein.
 
     0.593
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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