STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_250067Oxidoreductase domain protein. (343 aa)    
Predicted Functional Partners:
MPLA_250066
Xylose isomerase domain-containing protein TIM barrel.
 
 
  0.959
melA-2
Alpha-galactosidase.
  
  
  0.778
MPLA_1720001
ThuA domain-containing protein.
 
  
  0.771
MPLA_1290002
ThuA domain-containing protein.
 
     0.760
MPLA_1620032
Xylose isomerase domain protein TIM barrel.
 
 
  0.751
melA
Alpha-galactosidase, NAD(P)-binding.
  
  
  0.723
MPLA_430001
Oxidoreductase domain-containing protein.
  
    0.689
MPLA_140002
Xylose isomerase domain protein TIM barrel.
 
 
  0.678
MPLA_1160014
Uncharacterized protein.
  
 
  0.640
abfA
Alpha-N-arabinofuranosidase 1.
  
  
  0.618
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.