Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MPLA_290013Fusaric acid resistance protein conserved region. (693 aa)    
Predicted Functional Partners:
MPLA_670093
Nitrogen fixation protein nifQ.
  
    0.774
MPLA_290028
NifU_N domain-containing protein.
   
    0.744
parE
DNA topoisomerase 4 subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.
       0.643
MPLA_300008
RND efflux system, outer membrane lipoprotein, NodT family.
 
  
 0.612
bepC
Outer membrane efflux protein BepC.
 
  
 0.598
pheT
Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.580
MPLA_1650004
TolC family type I secretion outer membrane protein.
    
 0.562
MPLA_1820001
Uncharacterized protein.
  
     0.535
MPLA_590013
Uncharacterized protein.
  
     0.522
MPLA_1390143
Aspartate racemase.
   
    0.515
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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