Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_290014Uncharacterized protein. (373 aa)    
Predicted Functional Partners:
MPLA_810010
Uncharacterized protein.
  
     0.769
MPLA_810002
Pilus assembly protein CpaD.
  
     0.768
MPLA_810005
Peptidase A24A prepilin type IV.
  
     0.763
MPLA_1380004
TPR_REGION domain-containing protein.
  
     0.762
MPLA_570048
Uncharacterized protein.
  
     0.759
MPLA_810009
TadE family protein.
  
     0.758
MPLA_230032
Type IV pilus assembly PilZ.
  
     0.754
MPLA_580056
Uncharacterized protein.
  
     0.737
MPLA_810001
Response regulator receiver protein.
  
     0.737
MPLA_810008
T2SS-T3SS_pil_N domain-containing protein.
  
     0.733
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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