STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_300022Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. (438 aa)    
Predicted Functional Partners:
MPLA_1850018
Diaminopropionate ammonia-lyase.
 
    0.845
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
    
 0.823
MPLA_300019
ABC-type sugar transport system periplasmic component-like protein.
       0.773
MPLA_300020
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.773
MPLA_300021
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.773
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 0.771
MPLA_100051
Putative FMN-linked oxidoreductase dihydropyrimidine/dihydroorate dehydrogenase.
  
 0.757
MPLA_350013
Urate catabolism protein.
    
 0.726
MPLA_320133
Succinyl-diaminopimelate desuccinylase.
  
  
0.718
argI
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
 
 0.695
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.