STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_300022Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. (438 aa)    
Predicted Functional Partners:
MPLA_1850018
Diaminopropionate ammonia-lyase.
 
 
  0.843
MPLA_300019
ABC-type sugar transport system periplasmic component-like protein.
       0.773
MPLA_300020
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.773
MPLA_300021
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.773
MPLA_100051
Putative FMN-linked oxidoreductase dihydropyrimidine/dihydroorate dehydrogenase.
  
 0.766
MPLA_350013
Urate catabolism protein.
    
 0.727
MPLA_290035
Aminotransferase.
 
  
 0.669
MPLA_300018
ABC transporter related protein.
       0.664
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 0.660
fliG
Flagellar motor switch protein FliG.
   
   0.654
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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