STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_30044Zn-dependent oxidoreductase, NADPH:quinone reductase. (338 aa)    
Predicted Functional Partners:
MPLA_870003
AMP-dependent synthetase and ligase.
  
 0.913
MPLA_30045
Uncharacterized protein.
       0.773
MPLA_30046
Uncharacterized protein.
       0.689
MPLA_30047
Hydrolase.
   
   0.676
MPLA_1390157
2-acylglycerophosphoethanolamine acyltransferase.
   
 0.642
MPLA_1180011
N-acetyltransferase domain-containing protein.
    
  0.627
MPLA_1100045
AMP-dependent synthetase and ligase.
    
  0.624
MPLA_1240003
AMP-dependent synthetase and ligase.
    
  0.624
MPLA_1290018
Putative acid-CoA ligase.
    
  0.624
AAE
Acetate/butyrate--CoA ligase AAE7, peroxisomal.
    
  0.624
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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