MPLA_30062 protein (Mesorhizobium sp. ORS3359)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

MPLA_30062

ABC transporter, binding protein. (558 aa)

Predicted Functional Partners:

MPLA_30061

0.995

MPLA_30060

0.985

MPLA_660007

0.847

ugpC-12

0.821

MPLA_100022

0.805

MPLA_340100

0.798

MPLA_120028

0.755

MPLA_90104

0.755

MPLA_520034

0.725

MPLA_1070021

0.717

Your Current Organism:

Mesorhizobium sp. ORS3359

NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPLA_100022	MPLA_1070021	MPLA_100022	MPLA_1070021	Putative sugar ABC transporter, substrate binding protein ribose ABC transporter.	Transport permease protein.	0.669
MPLA_100022	MPLA_30060	MPLA_100022	MPLA_30060	Putative sugar ABC transporter, substrate binding protein ribose ABC transporter.	ABC transporter, permease protein.	0.467
MPLA_100022	MPLA_30061	MPLA_100022	MPLA_30061	Putative sugar ABC transporter, substrate binding protein ribose ABC transporter.	Binding-protein-dependent transport systems inner membrane component.	0.603
MPLA_100022	MPLA_30062	MPLA_100022	MPLA_30062	Putative sugar ABC transporter, substrate binding protein ribose ABC transporter.	ABC transporter, binding protein.	0.805
MPLA_100022	MPLA_340100	MPLA_100022	MPLA_340100	Putative sugar ABC transporter, substrate binding protein ribose ABC transporter.	Ribose ABC transporter, substrate-binding protein.	0.483
MPLA_100022	MPLA_520034	MPLA_100022	MPLA_520034	Putative sugar ABC transporter, substrate binding protein ribose ABC transporter.	Uncharacterized protein.	0.432
MPLA_100022	MPLA_660007	MPLA_100022	MPLA_660007	Putative sugar ABC transporter, substrate binding protein ribose ABC transporter.	ABC transporter binding protein.	0.571
MPLA_100022	ugpC-12	MPLA_100022	MPLA_30063	Putative sugar ABC transporter, substrate binding protein ribose ABC transporter.	Glycerol-3-phosphate transporter subunit ATP-binding component of ABC superfamily; Belongs to the ABC transporter superfamily.	0.499
MPLA_1070021	MPLA_100022	MPLA_1070021	MPLA_100022	Transport permease protein.	Putative sugar ABC transporter, substrate binding protein ribose ABC transporter.	0.669
MPLA_1070021	MPLA_120028	MPLA_1070021	MPLA_120028	Transport permease protein.	NMT1 domain-containing protein.	0.552
MPLA_1070021	MPLA_30061	MPLA_1070021	MPLA_30061	Transport permease protein.	Binding-protein-dependent transport systems inner membrane component.	0.587
MPLA_1070021	MPLA_30062	MPLA_1070021	MPLA_30062	Transport permease protein.	ABC transporter, binding protein.	0.717
MPLA_1070021	MPLA_340100	MPLA_1070021	MPLA_340100	Transport permease protein.	Ribose ABC transporter, substrate-binding protein.	0.598
MPLA_1070021	MPLA_520034	MPLA_1070021	MPLA_520034	Transport permease protein.	Uncharacterized protein.	0.896
MPLA_1070021	MPLA_660007	MPLA_1070021	MPLA_660007	Transport permease protein.	ABC transporter binding protein.	0.598
MPLA_1070021	ugpC-12	MPLA_1070021	MPLA_30063	Transport permease protein.	Glycerol-3-phosphate transporter subunit ATP-binding component of ABC superfamily; Belongs to the ABC transporter superfamily.	0.896
MPLA_120028	MPLA_1070021	MPLA_120028	MPLA_1070021	NMT1 domain-containing protein.	Transport permease protein.	0.552
MPLA_120028	MPLA_30061	MPLA_120028	MPLA_30061	NMT1 domain-containing protein.	Binding-protein-dependent transport systems inner membrane component.	0.592
MPLA_120028	MPLA_30062	MPLA_120028	MPLA_30062	NMT1 domain-containing protein.	ABC transporter, binding protein.	0.755
MPLA_120028	MPLA_340100	MPLA_120028	MPLA_340100	NMT1 domain-containing protein.	Ribose ABC transporter, substrate-binding protein.	0.733