STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_30081Nitrogenase cofactor synthesis protein nifS. (386 aa)    
Predicted Functional Partners:
MPLA_290028
NifU_N domain-containing protein.
  
 0.992
MPLA_670093
Nitrogen fixation protein nifQ.
  
 0.983
MPLA_210010
UPF0033 domain-containing protein; Belongs to the sulfur carrier protein TusA family.
   
 0.971
sufA
Fe-S cluster assembly protein; Belongs to the HesB/IscA family.
 
 
 0.966
MPLA_640002
Scaffold protein Nfu/NifU.
 
 0.963
MPLA_100028
Putative HTH-type transcriptional regulator rrf2-like.
 
 
 0.945
fdxB
2Fe-2S ferredoxin (FdII).
 
 0.945
iscA
FeS cluster assembly protein; Belongs to the HesB/IscA family.
 
 
 0.913
yadR
Putative chaperone involved in Fe-S cluster assembly and activation hesB-like; Belongs to the HesB/IscA family.
 
 
 0.908
MPLA_670021
Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.902
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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