STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_30085FeS assembly protein SufD. (431 aa)    
Predicted Functional Partners:
sufB
Transport protein associated with Fe-S cluster assembly.
 
0.999
sufC
Component of SufBCD complex, ATP-binding component of ABC superfamily.
 
 0.999
sufS
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.982
MPLA_30141
Aminotransferase.
 
 0.961
MPLA_800008
Cysteine desulfurase family protein.
 
 0.961
sufA
Fe-S cluster assembly protein; Belongs to the HesB/IscA family.
  
 
 0.911
MPLA_1800205
Uncharacterized SufE-like protein R01000.
 
 
 0.909
MPLA_30087
FeS_assembly_P domain-containing protein.
 
   
 0.907
MPLA_290028
NifU_N domain-containing protein.
 
 
 0.891
MPLA_670093
Nitrogen fixation protein nifQ.
  
 
 0.851
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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