STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_30109Bcr/CflA family efflux transporter. (422 aa)    
Predicted Functional Partners:
MPLA_30110
Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
       0.570
bepC
Outer membrane efflux protein BepC.
   
 0.511
MPLA_160044
Major facilitator superfamily MFS_1.
  
     0.490
MPLA_1650004
TolC family type I secretion outer membrane protein.
   
 0.486
MPLA_300008
RND efflux system, outer membrane lipoprotein, NodT family.
   
 0.486
trpE(G
Anthranilate synthase.
     
  0.439
MPLA_320080
Secretion protein HlyD family protein.
   
 0.427
MPLA_70023
Putative secretion protein.
   
 0.427
MPLA_730027
Secretion protein HlyD family protein.
   
 0.427
MPLA_860052
Secretion protein HlyD family protein.
   
 0.427
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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