Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MPLA_30114GntR family transcription regulator. (469 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.668
gltB
Glutamate synthase, large subunit.
   
 
  0.661
MPLA_520026
Pyridoxal kinase; Belongs to the pyridoxine kinase family.
 
  
 0.626
lysC
Aspartokinase; Belongs to the aspartokinase family.
   
 
 0.608
MPLA_1650028
Mur ligase middle domain protein.
    
  0.597
trpE(G
Anthranilate synthase.
   
 
 0.594
MPLA_30115
Uncharacterized protein.
       0.580
MPLA_660049
Glycine cleavage T protein (Aminomethyl transferase); Belongs to the GcvT family.
   
 
  0.557
MPLA_870003
AMP-dependent synthetase and ligase.
     
 0.536
MPLA_340118
Uncharacterized protein; Belongs to the LDH2/MDH2 oxidoreductase family.
     
  0.486
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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