Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_30128Extracellular ligand-binding receptor. (363 aa)    
Predicted Functional Partners:
MPLA_580014
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.941
MPLA_580015
annotation not available
  
 
  0.904
livH-2
Leucine/isoleucine/valine transporter subunit membrane component of ABC superfamily; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.893
MPLA_340133
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.885
MPLA_30127
Uncharacterized protein.
       0.847
livF-6
High-affinity branched-chain amino acid ABC transporter (ATP-binding protein).
  
 
  0.834
MPLA_1390122
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.825
MPLA_1390030
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.808
MPLA_90080
ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.789
livJ
Leucine/isoleucine/valine transporter subunit periplasmic-binding component of ABC superfamily.
  
  
 
0.786
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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