MPLA_30151 protein (Mesorhizobium sp. ORS3359)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MPLA_30151

Uncharacterized protein. (310 aa)

Predicted Functional Partners:

ilvH

0.991

ilvC

0.862

maeB

0.825

maeB-2

0.825

pdhB

0.754

MPLA_340130

0.734

leuD

0.637

MPLA_140096

0.627

MPLA_140097

0.627

pykA

0.613

Your Current Organism:

Mesorhizobium sp. ORS3359

NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPLA_140096	MPLA_140097	MPLA_140096	MPLA_140097	Cytochrome c oxidase subunit III.	Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.	0.999
MPLA_140096	MPLA_30151	MPLA_140096	MPLA_30151	Cytochrome c oxidase subunit III.	Uncharacterized protein.	0.627
MPLA_140096	pdhB	MPLA_140096	MPLA_1830074	Cytochrome c oxidase subunit III.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.794
MPLA_140097	MPLA_140096	MPLA_140097	MPLA_140096	Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.	Cytochrome c oxidase subunit III.	0.999
MPLA_140097	MPLA_30151	MPLA_140097	MPLA_30151	Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.	Uncharacterized protein.	0.627
MPLA_140097	pdhB	MPLA_140097	MPLA_1830074	Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.794
MPLA_30151	MPLA_140096	MPLA_30151	MPLA_140096	Uncharacterized protein.	Cytochrome c oxidase subunit III.	0.627
MPLA_30151	MPLA_140097	MPLA_30151	MPLA_140097	Uncharacterized protein.	Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.	0.627
MPLA_30151	MPLA_340130	MPLA_30151	MPLA_340130	Uncharacterized protein.	Indolepyruvate ferredoxin oxidoreductase.	0.734
MPLA_30151	ilvC	MPLA_30151	MPLA_240007	Uncharacterized protein.	Ketol-acid reductoisomerase (NADP(+)); Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.	0.862
MPLA_30151	ilvH	MPLA_30151	MPLA_250014	Uncharacterized protein.	Acetolactate synthase small subunit (AHAS) (Acetohydroxy-acid synthase small subunit) (ALS).	0.991
MPLA_30151	leuD	MPLA_30151	MPLA_430043	Uncharacterized protein.	3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.	0.637
MPLA_30151	maeB	MPLA_30151	MPLA_50008	Uncharacterized protein.	Putative fused malic enzyme oxidoreductase phosphotransacetylase.	0.825
MPLA_30151	maeB-2	MPLA_30151	MPLA_630023	Uncharacterized protein.	Putative fused malic enzyme oxidoreductase phosphotransacetylase.	0.825
MPLA_30151	pdhB	MPLA_30151	MPLA_1830074	Uncharacterized protein.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.754
MPLA_30151	pykA	MPLA_30151	MPLA_180004	Uncharacterized protein.	Pyruvate kinase; Belongs to the pyruvate kinase family.	0.613
MPLA_340130	MPLA_30151	MPLA_340130	MPLA_30151	Indolepyruvate ferredoxin oxidoreductase.	Uncharacterized protein.	0.734
MPLA_340130	ilvH	MPLA_340130	MPLA_250014	Indolepyruvate ferredoxin oxidoreductase.	Acetolactate synthase small subunit (AHAS) (Acetohydroxy-acid synthase small subunit) (ALS).	0.758
MPLA_340130	leuD	MPLA_340130	MPLA_430043	Indolepyruvate ferredoxin oxidoreductase.	3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.	0.680
MPLA_340130	maeB	MPLA_340130	MPLA_50008	Indolepyruvate ferredoxin oxidoreductase.	Putative fused malic enzyme oxidoreductase phosphotransacetylase.	0.939