STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_320055Dimethylglycine dehydrogenase; Belongs to the GcvT family. (805 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 0.995
soxD
Sarcosine oxidase subunit delta.
 
 0.985
soxD-4
Sarcosine oxidase subunit delta.
 
 0.984
MPLA_160088
Sarcosine oxidase, delta subunit family.
 
 0.983
soxD-2
Sarcosine oxidase subunit delta.
  
 0.982
soxD-3
Sarcosine oxidase subunit delta.
 
 0.982
soxD-5
Sarcosine oxidase subunit delta.
 
 0.981
MPLA_160087
Sarcosine oxidase, alpha subunit family; Belongs to the GcvT family.
 
0.975
soxA-2
Sarcosine oxidase subunit alpha.
 
0.972
soxA-3
Sarcosine oxidase subunit alpha.
 
0.972
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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