Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MPLA_320080Secretion protein HlyD family protein. (399 aa)    
Predicted Functional Partners:
MPLA_320081
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
 
 0.980
bepC
Outer membrane efflux protein BepC.
 
 0.951
MPLA_300008
RND efflux system, outer membrane lipoprotein, NodT family.
 
 0.928
MPLA_140155
Drug resistance transporter EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
 
 0.916
MPLA_70024
Putative transporter; Belongs to the major facilitator superfamily.
 
 0.915
MPLA_860051
EmrB/QacA subfamily drug resistance transporter; Belongs to the major facilitator superfamily.
 
 0.915
MPLA_1650004
TolC family type I secretion outer membrane protein.
  
 0.913
MPLA_860061
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
 
 0.911
emrB
Multidrug resistance protein B homolog; Belongs to the major facilitator superfamily.
 
 0.910
mdtA
Multidrug efflux system, subunit A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.829
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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