Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MPLA_2140035 | MPLA_830028 | MPLA_2140035 | MPLA_830028 | Cytochrome c oxidase polypeptide I fixN homolog; Belongs to the heme-copper respiratory oxidase family. | Nitrogen fixation protein FixQ. | 0.978 |
MPLA_2140035 | aau | MPLA_2140035 | MPLA_320104 | Cytochrome c oxidase polypeptide I fixN homolog; Belongs to the heme-copper respiratory oxidase family. | Protein aau3. | 0.543 |
MPLA_290028 | MPLA_30081 | MPLA_290028 | MPLA_30081 | NifU_N domain-containing protein. | Nitrogenase cofactor synthesis protein nifS. | 0.999 |
MPLA_290028 | MPLA_670021 | MPLA_290028 | MPLA_670021 | NifU_N domain-containing protein. | Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.936 |
MPLA_290028 | aau | MPLA_290028 | MPLA_320104 | NifU_N domain-containing protein. | Protein aau3. | 0.813 |
MPLA_290028 | iscS | MPLA_290028 | MPLA_670107 | NifU_N domain-containing protein. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.999 |
MPLA_290028 | nasA | MPLA_290028 | MPLA_130017 | NifU_N domain-containing protein. | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.662 |
MPLA_30081 | MPLA_290028 | MPLA_30081 | MPLA_290028 | Nitrogenase cofactor synthesis protein nifS. | NifU_N domain-containing protein. | 0.999 |
MPLA_30081 | MPLA_670021 | MPLA_30081 | MPLA_670021 | Nitrogenase cofactor synthesis protein nifS. | Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.943 |
MPLA_30081 | MPLA_670093 | MPLA_30081 | MPLA_670093 | Nitrogenase cofactor synthesis protein nifS. | Nitrogen fixation protein nifQ. | 0.998 |
MPLA_30081 | aau | MPLA_30081 | MPLA_320104 | Nitrogenase cofactor synthesis protein nifS. | Protein aau3. | 0.890 |
MPLA_30081 | iscS | MPLA_30081 | MPLA_670107 | Nitrogenase cofactor synthesis protein nifS. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.895 |
MPLA_30081 | nasA | MPLA_30081 | MPLA_130017 | Nitrogenase cofactor synthesis protein nifS. | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.767 |
MPLA_670021 | MPLA_290028 | MPLA_670021 | MPLA_290028 | Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | NifU_N domain-containing protein. | 0.936 |
MPLA_670021 | MPLA_30081 | MPLA_670021 | MPLA_30081 | Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Nitrogenase cofactor synthesis protein nifS. | 0.943 |
MPLA_670021 | MPLA_670093 | MPLA_670021 | MPLA_670093 | Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Nitrogen fixation protein nifQ. | 0.936 |
MPLA_670021 | aau | MPLA_670021 | MPLA_320104 | Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Protein aau3. | 0.550 |
MPLA_670021 | iscS | MPLA_670021 | MPLA_670107 | Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.943 |
MPLA_670021 | nasA | MPLA_670021 | MPLA_130017 | Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.886 |
MPLA_670093 | MPLA_30081 | MPLA_670093 | MPLA_30081 | Nitrogen fixation protein nifQ. | Nitrogenase cofactor synthesis protein nifS. | 0.998 |
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