STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_320107Periplasmic binding protein. (302 aa)    
Predicted Functional Partners:
hmuV
Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 0.999
btuC
Vitamin B12 transporter subunit: membrane component of ABC superfamily; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.998
hmuS
Hemin transport protein HmuS.
 
 
 0.996
hemS
Hemin transport protein HemS.
 
 
 0.984
MPLA_320110
TonB-dependent heme/hemoglobin receptor family protein.
 
  
 0.919
MPLA_320109
Hemin uptake protein hemP.
     
 0.827
MPLA_320112
TonB family protein.
 
  
 0.797
MPLA_320111
Uncharacterized protein.
 
     0.796
MPLA_320113
Antibiotic biosynthesis monooxygenase.
 
     0.724
MPLA_160048
FAD-binding 9 siderophore-interacting domain-containing protein.
 
    0.605
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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