STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_320113Antibiotic biosynthesis monooxygenase. (104 aa)    
Predicted Functional Partners:
MPLA_320111
Uncharacterized protein.
 
     0.822
MPLA_320110
TonB-dependent heme/hemoglobin receptor family protein.
 
    0.797
MPLA_320112
TonB family protein.
 
    0.734
MPLA_320107
Periplasmic binding protein.
 
     0.724
hmuV
Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
     0.696
btuC
Vitamin B12 transporter subunit: membrane component of ABC superfamily; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   
 0.649
MPLA_1100019
Ferredoxin.
     
  0.644
yeaX
Putative dioxygenase subunit.
     
  0.644
MPLA_670021
Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
  0.644
hmuS
Hemin transport protein HmuS.
 
     0.555
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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