STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yliC-2Putative peptide transporter permease subunit: membrane component of ABC superfamily. (315 aa)    
Predicted Functional Partners:
yliD
Putative peptide transporter permease subunit: membrane component of ABC superfamily.
 
 
0.995
MPLA_320134
Extracellular solute-binding protein family 5.
  0.977
MPLA_1800146
Binding-protein-dependent transport systems inner membrane component.
  
  0.965
yliD-2
Putative peptide transporter permease subunit: membrane component of ABC superfamily.
  
  0.958
dppC-4
Dipeptide transporter membrane component of ABC superfamily.
  
  0.955
dppC-3
Dipeptide transporter membrane component of ABC superfamily.
  
  0.952
MPLA_800014
ABC transporter ATP-binding component; Belongs to the ABC transporter superfamily.
 
  0.950
dppC-2
Dipeptide transporter membrane component of ABC superfamily.
  
  0.946
ddpD
D-ala-D-ala transporter subunit ATP-binding component of ABC superfamily; Belongs to the ABC transporter superfamily.
  
  0.940
dppF
Dipeptide transporter ATP-binding component of ABC superfamily; Belongs to the ABC transporter superfamily.
 
  0.931
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
Server load: low (36%) [HD]