STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yliA-3Putative peptide transport fused subunits of ABC superfamily: ATP-binding components; Belongs to the ABC transporter superfamily. (540 aa)    
Predicted Functional Partners:
yliD
Putative peptide transporter permease subunit: membrane component of ABC superfamily.
 
  0.942
yliC-2
Putative peptide transporter permease subunit: membrane component of ABC superfamily.
 
 
  0.905
MPLA_1520013
Putative oligopeptide transport protein (ABC superfamily, membrane).
 
 
 0.898
yejE
Putative oligopeptide transporter subunit permease component of ABC superfamily transporter.
 
 
 0.886
MPLA_320134
Extracellular solute-binding protein family 5.
  
 
  0.774
yejA-2
annotation not available
 
 
 0.772
MPLA_1610002
Putative peptide ABC transporter permease protein y4tQ.
 
  0.772
yejA
annotation not available
 
 
 0.768
MPLA_1830126
SBP_bac_5 domain-containing protein.
 
 
 0.759
yliD-2
Putative peptide transporter permease subunit: membrane component of ABC superfamily.
 
  0.665
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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