STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
MPLA_320146Uncharacterized aminotransferase y4uB; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (459 aa)    
Predicted Functional Partners:
speB
Agmatinase; Belongs to the arginase family.
  
 
  0.875
MPLA_1190015
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
  
 0.849
MPLA_1830100
Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
  
 
  0.847
bioD
ATP-dependent dethiobiotin synthetase BioD; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
  
 
 0.828
MPLA_160186
Putative ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
     
 0.825
MPLA_1110003
Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.822
puuC
Gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent; Belongs to the aldehyde dehydrogenase family.
     
  0.822
MPLA_690006
Putative aldehyde dehydrogenase SE_1720.
     
  0.822
lysC
Aspartokinase; Belongs to the aspartokinase family.
    
 0.763
puuB
Gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding.
  
  
  0.756
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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