Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MPLA_100045 | MPLA_1800219 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | FAD dependent oxidoreductase; Belongs to the GcvT family. | 0.891 |
MPLA_100045 | MPLA_320149 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | Methyltransferase; Belongs to the trimethylamine methyltransferase family. | 0.674 |
MPLA_100045 | MPLA_320150 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | Sarcosine dehydrogenase; Belongs to the GcvT family. | 0.888 |
MPLA_100045 | MPLA_320156 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | Homocysteine S-methyltransferase. | 0.839 |
MPLA_100045 | MPLA_320161 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 4Fe-4S ferredoxin-type domain-containing protein. | 0.430 |
MPLA_100045 | MPLA_320164 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | Methionine synthase. | 0.686 |
MPLA_100045 | MPLA_320166 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | DUF1638 domain-containing protein. | 0.415 |
MPLA_100045 | MPLA_320171 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | Virulence_fact domain-containing protein. | 0.451 |
MPLA_100045 | MPLA_320174 | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 5-methyltetrahydrofolate S-homocysteine methyltransferase. | 0.802 |
MPLA_1800219 | MPLA_100045 | FAD dependent oxidoreductase; Belongs to the GcvT family. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.891 |
MPLA_1800219 | MPLA_320149 | FAD dependent oxidoreductase; Belongs to the GcvT family. | Methyltransferase; Belongs to the trimethylamine methyltransferase family. | 0.595 |
MPLA_1800219 | MPLA_320150 | FAD dependent oxidoreductase; Belongs to the GcvT family. | Sarcosine dehydrogenase; Belongs to the GcvT family. | 0.892 |
MPLA_1800219 | MPLA_320156 | FAD dependent oxidoreductase; Belongs to the GcvT family. | Homocysteine S-methyltransferase. | 0.819 |
MPLA_1800219 | MPLA_320164 | FAD dependent oxidoreductase; Belongs to the GcvT family. | Methionine synthase. | 0.655 |
MPLA_1800219 | MPLA_320174 | FAD dependent oxidoreductase; Belongs to the GcvT family. | 5-methyltetrahydrofolate S-homocysteine methyltransferase. | 0.776 |
MPLA_320149 | MPLA_100045 | Methyltransferase; Belongs to the trimethylamine methyltransferase family. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.674 |
MPLA_320149 | MPLA_1800219 | Methyltransferase; Belongs to the trimethylamine methyltransferase family. | FAD dependent oxidoreductase; Belongs to the GcvT family. | 0.595 |
MPLA_320149 | MPLA_320150 | Methyltransferase; Belongs to the trimethylamine methyltransferase family. | Sarcosine dehydrogenase; Belongs to the GcvT family. | 0.855 |
MPLA_320149 | MPLA_320156 | Methyltransferase; Belongs to the trimethylamine methyltransferase family. | Homocysteine S-methyltransferase. | 0.639 |
MPLA_320149 | MPLA_320161 | Methyltransferase; Belongs to the trimethylamine methyltransferase family. | 4Fe-4S ferredoxin-type domain-containing protein. | 0.666 |
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