STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_320154Fatty acid desaturase. (340 aa)    
Predicted Functional Partners:
MPLA_320153
Uncharacterized protein.
 
     0.930
MPLA_320155
Helix-turn-helix domain-containing protein.
 
     0.879
yeaX
Putative dioxygenase subunit.
 
 
 0.821
MPLA_1100019
Ferredoxin.
  
 
 0.776
MPLA_670021
Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.776
MPLA_100041
Permease protein of dipeptide ABC transporter.
  
     0.726
MPLA_100042
ATP-binding protein of dipeptide ABC transporter; Belongs to the ABC transporter superfamily.
  
     0.668
MPLA_100040
Binding-protein-dependent transport systems inner membrane component.
  
     0.660
MPLA_320056
SBP_bac_5 domain-containing protein.
  
     0.632
MPLA_720029
Family 5 extracellular solute-binding protein.
  
     0.632
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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