STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_3201614Fe-4S ferredoxin-type domain-containing protein. (226 aa)    
Predicted Functional Partners:
fdsA
Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 0.924
sdhA
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 0.918
MPLA_20046
NADH-ubiquinone dehydrogenase subunit.
   
 0.879
MPLA_20048
NADH-quinone oxidoreductase, E subunit.
   
 0.879
nuoE
NADH:ubiquinone oxidoreductase, chain E.
   
 0.879
MPLA_340130
Indolepyruvate ferredoxin oxidoreductase.
    
 0.824
etfB
annotation not available
   
 0.816
fixA
Protein fixA electron transfer flavoprotein beta-subunit (Beta-ETF).
   
 0.816
maeB
Putative fused malic enzyme oxidoreductase phosphotransacetylase.
    
 0.813
maeB-2
Putative fused malic enzyme oxidoreductase phosphotransacetylase.
    
 0.813
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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