STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_340002Uncharacterized protein. (296 aa)    
Predicted Functional Partners:
MPLA_340003
LmbE family protein.
       0.567
ispU
Isoprenyl transferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
  0.540
MPLA_1390083
Putative ABC transporter (Protein fusion consisting of two ATP-binding domains and permease).
     
  0.473
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
    
  0.445
ARSI
Arylsulfatase I.
    
  0.439
betC
Choline-sulfatase.
    
  0.439
MPLA_190008
Sulfatase.
    
  0.439
ispA
Geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
   
  0.434
ispB
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
    
  0.425
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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