STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_340003LmbE family protein. (232 aa)    
Predicted Functional Partners:
MPLA_1390079
Demethylmenaquinone methyltransferase.
 
  
 0.749
cysS
Cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.590
MPLA_930054
dTDP-4-dehydrorhamnose reductase; Belongs to the glycosyl hydrolase 1 family.
    
 0.575
cpsB
Mannose-1-phosphate guanyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
     
  0.570
MPLA_340002
Uncharacterized protein.
       0.567
MPLA_1390061
Uncharacterized protein.
 
  
 0.560
melA-2
Alpha-galactosidase.
 
  
  0.560
melA
Alpha-galactosidase, NAD(P)-binding.
 
  
  0.559
nagA
N-acetylglucosamine-6-phosphate deacetylase.
     
 0.543
MPLA_830056
Glycosyl transferase, group 1.
  
 
 0.444
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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