STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
exoFExopolysaccharide production protein exoF. (392 aa)    
Predicted Functional Partners:
MPLA_1860016
Lipopolysaccharide biosynthesis protein.
 
 0.986
MPLA_1650017
Lipopolysaccharide biosynthesis protein.
 
 0.985
exoP
Succinoglycan biosynthesis transport protein ExoP.
 
 0.985
MPLA_230063
Exopolysaccharide transport protein family.
 
 0.979
MPLA_1830210
CPSC/CAPB subfamily ATPase.
 
 0.978
MPLA_230067
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.944
rfbE
O-antigen export system ATP-binding protein RfbE.
  
 
 0.888
MPLA_1800108
ABC-2 type transporter.
  
 
 0.875
exoA
Succinoglycan biosynthesis protein exoA.
 
  
 0.870
exoQ
Exopolysaccharide production protein exoQ.
 
 
 0.861
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.