Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MPLA_340061Periplasmic binding protein/LacI transcriptional regulator. (312 aa)    
Predicted Functional Partners:
rbsC-4
Putative ABC transporter, Membrane component ( high-affinity D-ribose transport protein); Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.917
rbsA-9
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  0.851
rbsC-3
D-ribose transporter subunit membrane component of ABC superfamily; Belongs to the binding-protein-dependent transport system permease family.
  
  0.779
MPLA_1670009
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
  0.775
MPLA_1650128
Two-component sensor/response regulator hybrid.
    
 0.763
rbsC-2
D-ribose transporter subunit membrane component of ABC superfamily; Belongs to the binding-protein-dependent transport system permease family.
  
  0.754
MPLA_860005
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
  0.749
rbsC-7
D-ribose transporter subunit membrane component of ABC superfamily; Belongs to the binding-protein-dependent transport system permease family.
  
  0.749
MPLA_300020
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
  0.748
MPLA_740022
ATP-binding region ATPase domain protein.
   
 0.747
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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