Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MPLA_340064Carbohydrate kinase. (459 aa)    
Predicted Functional Partners:
yuxG
Uncharacterized oxidoreductase YuxG.
 
  
 0.933
MPLA_340065
Transcriptional regulator.
 
   
 0.923
MPLA_1020012
Putative enzyme.
 
  
 0.919
MPLA_340066
Aldolase_II domain-containing protein.
 
  
 0.903
MPLA_1390175
Putative oxidoreductase.
 
  
 0.897
rbsA-9
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
     0.811
rbsC-4
Putative ABC transporter, Membrane component ( high-affinity D-ribose transport protein); Belongs to the binding-protein-dependent transport system permease family.
       0.789
MPLA_1020014
DeoR family transcription regulator.
 
   
 0.772
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
 
 0.751
MPLA_1020015
Rhamnose ABC transporter, periplasmic rhamnose-binding protein.
  
    0.744
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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