STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dgoDGalactonate dehydratase. (382 aa)    
Predicted Functional Partners:
dgoK
2-oxo-3-deoxygalactonate kinase.
 
 
 0.903
dgoR
Putative DNA-binding transcriptional regulator.
       0.778
MPLA_70012
Mandelate racemase/muconate lactonizing protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
  
 
0.750
MPLA_1390068
MR_MLE domain-containing protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
  
 
0.720
MPLA_1390062
MR_MLE domain-containing protein.
  
  
 
0.711
araF
L-arabinose-binding periplasmic protein.
 
     0.630
kdgK
Ketodeoxygluconokinase.
    
  0.596
MPLA_660019
Mandelate racemase/muconate lactonizing protein.
  
  
 
0.591
MPLA_810025
DUF126 domain-containing protein.
     
  0.557
MPLA_1410003
Macro domain-containing protein.
   
   0.525
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
Server load: low (16%) [HD]