Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bdh3-hydroxybutyrate dehydrogenase type 2. (243 aa)    
Predicted Functional Partners:
MPLA_870003
AMP-dependent synthetase and ligase.
  
 0.901
MPLA_340084
L-fuconate dehydratase.
 
  
  0.876
MPLA_340086
MaoC domain protein dehydratase.
  
  0.850
MPLA_340087
Oxidoreductase domain protein.
 
  
  0.819
MPLA_340089
Mandelate racemase/muconate lactonizing protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
  0.818
MPLA_340088
Uncharacterized protein.
 
     0.796
MPLA_1110001
Ureidoglycolate lyase.
 
 
  0.779
MPLA_340092
Sugar ABC transporter, permease protein.
 
     0.779
ugpC-14
Glycerol-3-phosphate transporter subunit ATP-binding component of ABC superfamily; Belongs to the ABC transporter superfamily.
       0.751
MPLA_340091
Binding-protein-dependent transport systems inner membrane component.
       0.751
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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