hisJ-2 protein (Mesorhizobium sp. ORS3359) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

hisJ-2

annotation not available (265 aa)

Predicted Functional Partners:

hisP-2

0.972

MPLA_340117

0.952

hisQ-2

0.945

hisQ

0.899

artQ

0.898

hisM

0.895

MPLA_1830160

0.889

yecS-3

0.872

gltK

0.866

MPLA_680061

0.856

Your Current Organism:

Mesorhizobium sp. ORS3359

NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPLA_1830160	MPLA_340117	MPLA_1830160	MPLA_340117	Polar amino acid ABC transporter, inner membrane subunit.	Polar amino acid ABC transporter inner membrane subunit.	0.919
MPLA_1830160	MPLA_680061	MPLA_1830160	MPLA_680061	Polar amino acid ABC transporter, inner membrane subunit.	Putative amino acid ABC transporter, permease protein.	0.775
MPLA_1830160	artQ	MPLA_1830160	MPLA_1830159	Polar amino acid ABC transporter, inner membrane subunit.	Arginine transporter subunit membrane component of ABC superfamily.	0.989
MPLA_1830160	gltK	MPLA_1830160	MPLA_680062	Polar amino acid ABC transporter, inner membrane subunit.	Glutamate and aspartate transporter subunit membrane component of ABC superfamily.	0.909
MPLA_1830160	hisJ-2	MPLA_1830160	MPLA_340115	Polar amino acid ABC transporter, inner membrane subunit.	annotation not available	0.889
MPLA_1830160	hisM	MPLA_1830160	MPLA_1170005	Polar amino acid ABC transporter, inner membrane subunit.	Histidine/lysine/arginine/ornithine transporter subunit membrane component of ABC superfamily.	0.863
MPLA_1830160	hisP-2	MPLA_1830160	MPLA_340114	Polar amino acid ABC transporter, inner membrane subunit.	Histidine/lysine/arginine/ornithine transporter subunit ATP-binding component of ABC superfamily.	0.936
MPLA_1830160	hisQ	MPLA_1830160	MPLA_1170006	Polar amino acid ABC transporter, inner membrane subunit.	Histidine/lysine/arginine/ornithine transporter subunit membrane component of ABC superfamily.	0.934
MPLA_1830160	hisQ-2	MPLA_1830160	MPLA_340116	Polar amino acid ABC transporter, inner membrane subunit.	Histidine/lysine/arginine/ornithine transporter subunit membrane component of ABC superfamily.	0.954
MPLA_1830160	yecS-3	MPLA_1830160	MPLA_990002	Polar amino acid ABC transporter, inner membrane subunit.	Putative transporter subunit: permease component of ABC superfamily transporter.	0.915
MPLA_340117	MPLA_1830160	MPLA_340117	MPLA_1830160	Polar amino acid ABC transporter inner membrane subunit.	Polar amino acid ABC transporter, inner membrane subunit.	0.919
MPLA_340117	MPLA_680061	MPLA_340117	MPLA_680061	Polar amino acid ABC transporter inner membrane subunit.	Putative amino acid ABC transporter, permease protein.	0.784
MPLA_340117	artQ	MPLA_340117	MPLA_1830159	Polar amino acid ABC transporter inner membrane subunit.	Arginine transporter subunit membrane component of ABC superfamily.	0.948
MPLA_340117	gltK	MPLA_340117	MPLA_680062	Polar amino acid ABC transporter inner membrane subunit.	Glutamate and aspartate transporter subunit membrane component of ABC superfamily.	0.910
MPLA_340117	hisJ-2	MPLA_340117	MPLA_340115	Polar amino acid ABC transporter inner membrane subunit.	annotation not available	0.952
MPLA_340117	hisM	MPLA_340117	MPLA_1170005	Polar amino acid ABC transporter inner membrane subunit.	Histidine/lysine/arginine/ornithine transporter subunit membrane component of ABC superfamily.	0.859
MPLA_340117	hisP-2	MPLA_340117	MPLA_340114	Polar amino acid ABC transporter inner membrane subunit.	Histidine/lysine/arginine/ornithine transporter subunit ATP-binding component of ABC superfamily.	0.957
MPLA_340117	hisQ	MPLA_340117	MPLA_1170006	Polar amino acid ABC transporter inner membrane subunit.	Histidine/lysine/arginine/ornithine transporter subunit membrane component of ABC superfamily.	0.922
MPLA_340117	hisQ-2	MPLA_340117	MPLA_340116	Polar amino acid ABC transporter inner membrane subunit.	Histidine/lysine/arginine/ornithine transporter subunit membrane component of ABC superfamily.	0.987
MPLA_340117	yecS-3	MPLA_340117	MPLA_990002	Polar amino acid ABC transporter inner membrane subunit.	Putative transporter subunit: permease component of ABC superfamily transporter.	0.919