STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_340143Uncharacterized protein. (297 aa)    
Predicted Functional Partners:
MPLA_340142
Transcriptional regulator.
       0.568
ispU
Isoprenyl transferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
  0.540
HPR
Glyoxylate/hydroxypyruvate reductase A HPR2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
    0.519
MPLA_340144
Uncharacterized protein.
  
    0.503
MPLA_1390083
Putative ABC transporter (Protein fusion consisting of two ATP-binding domains and permease).
     
  0.473
MPLA_340139
Outer membrane protein.
 
     0.468
ispA
Geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
   
  0.440
ARSI
Arylsulfatase I.
    
  0.439
betC
Choline-sulfatase.
    
  0.439
MPLA_190008
Sulfatase.
    
  0.439
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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