Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
puuA-2Gamma-Glu-putrescine synthase; Belongs to the glutamine synthetase family. (468 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase, large subunit.
  
 
 0.921
MPLA_340152
Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    0.916
MPLA_140275
Glutamine synthetase; Belongs to the glutamine synthetase family.
  
  
 
0.866
MPLA_1650031
Glutamate--putrescine ligase; Belongs to the glutamine synthetase family.
  
  
 
0.857
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
 0.855
glnA
Glutamine synthetase.
  
  
 
0.854
carB
Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.
  
 0.852
glnII
Glutamine synthetase.
    
 0.843
gltD
Glutamate synthase, 4Fe-4S protein, small subunit.
  
 
 0.842
carA
Carbamoyl-phosphate synthase small chain; Belongs to the CarA family.
  
 
 0.841
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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