STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_350014Uncharacterized protein. (286 aa)    
Predicted Functional Partners:
allA
Ureidoglycolate lyase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
 
  
 0.991
MPLA_110009
Amidase, hydantoinase/carbamoylase family.
 
 
 0.841
MPLA_350016
CMP/dCMP deaminase zinc-binding protein.
       0.833
MPLA_320068
Amidase, hydantoinase/carbamoylase family protein.
  
 
 0.804
MPLA_350013
Urate catabolism protein.
 
     0.746
MPLA_1110001
Ureidoglycolate lyase.
     
  0.721
MPLA_1390033
5-carboxymethyl-2-hydroxymuconate Delta-isomerase.
     
  0.663
MPLA_770018
MhpD protein.
     
  0.663
sgaA
Serine--glyoxylate aminotransferase.
 
  
  0.642
MPLA_340118
Uncharacterized protein; Belongs to the LDH2/MDH2 oxidoreductase family.
  
 
 0.640
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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