STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_380001Sigma70_r2 domain-containing protein; Belongs to the sigma-70 factor family. (403 aa)    
Predicted Functional Partners:
MPLA_160104
YCII domain-containing protein.
 
    0.818
MPLA_1200002
YCII-related protein.
 
    0.795
MPLA_490003
YCII domain-containing protein.
 
    0.795
MPLA_1280003
YCII domain-containing protein.
 
     0.792
MPLA_160009
YCII-like protein.
 
     0.770
MPLA_2130008
Uncharacterized protein.
 
     0.560
MPLA_810050
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.481
MPLA_1800036
Uncharacterized protein.
  
     0.410
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.