STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_390013Outer membrane lipoprotein GNA33, membrane-bound lytic murein transglycosylase. (367 aa)    
Predicted Functional Partners:
MPLA_390012
Smr protein/MutS2.
 
     0.899
MPLA_390011
XRE family transcriptional regulator.
       0.847
MPLA_390014
Import inner membrane translocase subunit Tim44.
 
     0.830
fxsA
Phage T7 F exclusion suppressor FxsA.
       0.589
secB
Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
       0.486
MPLA_1170054
PTS system fructose subfamily IIA component.
  
     0.407
ribF
Riboflavin biosynthesis protein; Belongs to the ribF family.
      
 0.402
MPLA_310017
Peptidase M23.
      
 0.401
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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