holA protein (Mesorhizobium sp. ORS3359) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

holA

DNA polymerase III subunit delta. (347 aa)

Predicted Functional Partners:

dnaX

0.998

dnaN

0.998

MPLA_1270010

0.997

MPLA_1830104

0.997

dnaE

0.996

dnaQ

0.982

dnaE-2

0.982

MPLA_1170060

0.770

MPLA_390014

0.727

MPLA_570009

0.724

Your Current Organism:

Mesorhizobium sp. ORS3359

NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPLA_1170060	MPLA_1270010	MPLA_1170060	MPLA_1270010	Double-strand break repair protein AddB.	Uncharacterized protein.	0.705
MPLA_1170060	MPLA_390014	MPLA_1170060	MPLA_390014	Double-strand break repair protein AddB.	Import inner membrane translocase subunit Tim44.	0.741
MPLA_1170060	MPLA_570009	MPLA_1170060	MPLA_570009	Double-strand break repair protein AddB.	Uncharacterized protein.	0.546
MPLA_1170060	dnaN	MPLA_1170060	MPLA_810019	Double-strand break repair protein AddB.	Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication a [...]	0.521
MPLA_1170060	holA	MPLA_1170060	MPLA_400012	Double-strand break repair protein AddB.	DNA polymerase III subunit delta.	0.770
MPLA_1270010	MPLA_1170060	MPLA_1270010	MPLA_1170060	Uncharacterized protein.	Double-strand break repair protein AddB.	0.705
MPLA_1270010	MPLA_1830104	MPLA_1270010	MPLA_1830104	Uncharacterized protein.	DNA polymerase III, delta prime subunit.	0.997
MPLA_1270010	dnaE	MPLA_1270010	MPLA_280007	Uncharacterized protein.	DNA polymerase III subunit alpha.	0.995
MPLA_1270010	dnaE-2	MPLA_1270010	MPLA_430028	Uncharacterized protein.	Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.	0.979
MPLA_1270010	dnaN	MPLA_1270010	MPLA_810019	Uncharacterized protein.	Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication a [...]	0.995
MPLA_1270010	dnaQ	MPLA_1270010	MPLA_390017	Uncharacterized protein.	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	0.932
MPLA_1270010	dnaX	MPLA_1270010	MPLA_1520004	Uncharacterized protein.	DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.996
MPLA_1270010	holA	MPLA_1270010	MPLA_400012	Uncharacterized protein.	DNA polymerase III subunit delta.	0.997
MPLA_1830104	MPLA_1270010	MPLA_1830104	MPLA_1270010	DNA polymerase III, delta prime subunit.	Uncharacterized protein.	0.997
MPLA_1830104	dnaE	MPLA_1830104	MPLA_280007	DNA polymerase III, delta prime subunit.	DNA polymerase III subunit alpha.	0.996
MPLA_1830104	dnaE-2	MPLA_1830104	MPLA_430028	DNA polymerase III, delta prime subunit.	Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.	0.987
MPLA_1830104	dnaN	MPLA_1830104	MPLA_810019	DNA polymerase III, delta prime subunit.	Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication a [...]	0.998
MPLA_1830104	dnaQ	MPLA_1830104	MPLA_390017	DNA polymerase III, delta prime subunit.	DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	0.931
MPLA_1830104	dnaX	MPLA_1830104	MPLA_1520004	DNA polymerase III, delta prime subunit.	DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.997
MPLA_1830104	holA	MPLA_1830104	MPLA_400012	DNA polymerase III, delta prime subunit.	DNA polymerase III subunit delta.	0.997