STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bkdBDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (436 aa)    
Predicted Functional Partners:
bkdA
2-oxoisovalerate dehydrogenase subunit alpha.
 
 0.999
bkdA-2
2-oxoisovalerate dehydrogenase subunit beta.
 
 0.999
sucA
annotation not available
 
 0.998
lpd
Dihydrolipoyl dehydrogenase.
 
 0.997
MPLA_1550067
Transketolase central region.
 
 0.995
lpD
Dihydrolipoyl dehydrogenase.
 
 0.995
lpd-2
Dihydrolipoyl dehydrogenase.
 
 0.995
pdhB
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
 0.994
acoA
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha.
 
 0.990
pdhA
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
 0.987
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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