Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MPLA_1550067 | bkdA | MPLA_1550067 | MPLA_400013 | Transketolase central region. | 2-oxoisovalerate dehydrogenase subunit alpha. | 0.999 |
MPLA_1550067 | bkdB | MPLA_1550067 | MPLA_400015 | Transketolase central region. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.995 |
MPLA_1550067 | gcvP | MPLA_1550067 | MPLA_290003 | Transketolase central region. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.406 |
MPLA_1550067 | lpd | MPLA_1550067 | MPLA_410001 | Transketolase central region. | Dihydrolipoyl dehydrogenase. | 0.981 |
MPLA_1550067 | pdhA | MPLA_1550067 | MPLA_1830073 | Transketolase central region. | Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.999 |
MPLA_1550067 | pdhB | MPLA_1550067 | MPLA_1830074 | Transketolase central region. | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.983 |
MPLA_1550067 | pdhC | MPLA_1550067 | MPLA_1550068 | Transketolase central region. | Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.999 |
MPLA_1550067 | sucA | MPLA_1550067 | MPLA_450019 | Transketolase central region. | annotation not available | 0.885 |
MPLA_1550067 | sucB | MPLA_1550067 | MPLA_450020 | Transketolase central region. | Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.995 |
bkdA | MPLA_1550067 | MPLA_400013 | MPLA_1550067 | 2-oxoisovalerate dehydrogenase subunit alpha. | Transketolase central region. | 0.999 |
bkdA | bkdA-2 | MPLA_400013 | MPLA_400014 | 2-oxoisovalerate dehydrogenase subunit alpha. | 2-oxoisovalerate dehydrogenase subunit beta. | 0.999 |
bkdA | bkdB | MPLA_400013 | MPLA_400015 | 2-oxoisovalerate dehydrogenase subunit alpha. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.999 |
bkdA | lpd | MPLA_400013 | MPLA_410001 | 2-oxoisovalerate dehydrogenase subunit alpha. | Dihydrolipoyl dehydrogenase. | 0.990 |
bkdA | pdhB | MPLA_400013 | MPLA_1830074 | 2-oxoisovalerate dehydrogenase subunit alpha. | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.999 |
bkdA | pdhC | MPLA_400013 | MPLA_1550068 | 2-oxoisovalerate dehydrogenase subunit alpha. | Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.989 |
bkdA | sucA | MPLA_400013 | MPLA_450019 | 2-oxoisovalerate dehydrogenase subunit alpha. | annotation not available | 0.823 |
bkdA | sucB | MPLA_400013 | MPLA_450020 | 2-oxoisovalerate dehydrogenase subunit alpha. | Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.983 |
bkdA-2 | bkdA | MPLA_400014 | MPLA_400013 | 2-oxoisovalerate dehydrogenase subunit beta. | 2-oxoisovalerate dehydrogenase subunit alpha. | 0.999 |
bkdA-2 | bkdB | MPLA_400014 | MPLA_400015 | 2-oxoisovalerate dehydrogenase subunit beta. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.999 |
bkdA-2 | gcvP | MPLA_400014 | MPLA_290003 | 2-oxoisovalerate dehydrogenase subunit beta. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.406 |
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