STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_430001Oxidoreductase domain-containing protein. (675 aa)    
Predicted Functional Partners:
dkgA
2,5-diketo-D-gluconate reductase A.
  
 0.728
yeaE
Putative oxidoreductase.
  
 0.728
MPLA_230034
ANK_REP_REGION domain-containing protein.
    
  0.693
MPLA_250067
Oxidoreductase domain protein.
  
    0.689
MPLA_770081
Uncharacterized protein.
  
  0.687
lacF
Lactose transport system permease protein lacF.
 
     0.677
MPLA_430003
Binding-protein-dependent transport systems inner membrane component.
 
     0.669
MPLA_430005
ABC transporter sugar binding protein.
 
     0.659
wbpE
UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.645
arnB
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.645
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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